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  5. Solyc01g105630

Solyc01g105630


Description : Calmodulin, putative (AHRD V3.3 *** B9S4P7_RICCO)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g105630
Cluster HCCA clusters: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
107557 No alias calmodulin 5 0.02 Orthogroups_2024-Update
141966 No alias calmodulin 5 0.03 Orthogroups_2024-Update
A4A49_24311 No alias calmodulin-like protein 8 0.04 Orthogroups_2024-Update
Bradi2g10010 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Bradi4g43630 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Brara.C02103.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.03 Orthogroups_2024-Update
Brara.G01708.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.03 Orthogroups_2024-Update
Glyma.19G160100 No alias calmodulin 5 0.03 Orthogroups_2024-Update
Glyma.20G224300 No alias calmodulin 8 0.03 Orthogroups_2024-Update
HORVU5Hr1G014060.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Potri.013G040300 No alias calmodulin-like 11 0.03 Orthogroups_2024-Update
Pp1s58_258V6 No alias calmodulin 0.03 Orthogroups_2024-Update
Seita.5G354700.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.03 Orthogroups_2024-Update
Solyc10g081170 No alias Calmodulin 2 0.05 Orthogroups_2024-Update
evm.model.contig_2024.16 No alias (p05434|catr_chlre : 126.0) Caltractin (Centrin) (20 kDa... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 73
IPR002048 EF_hand_dom 83 145
No external refs found!