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  5. Sopen01g010480

Sopen01g010480


Description : Cyclin, N-terminal domain


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g010480
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
A4A49_04871 No alias cyclin-d3-2 0.02 Orthogroups_2024-Update
At3g50070 No alias CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15] 0.03 Orthogroups_2024-Update
Bradi4g32556 No alias CYCLIN D4;1 0.02 Orthogroups_2024-Update
Brara.B01898.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Cre09.g414416 No alias Cyclin family protein 0.02 Orthogroups_2024-Update
GRMZM2G476685 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Glyma.02G212400 No alias Cyclin D2;1 0.03 Orthogroups_2024-Update
Glyma.04G045500 No alias cyclin d5;1 0.02 Orthogroups_2024-Update
Glyma.05G106800 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Glyma.12G199300 No alias Cyclin D6;1 0.02 Orthogroups_2024-Update
Glyma.13G303000 No alias Cyclin D6;1 0.02 Orthogroups_2024-Update
HORVU5Hr1G059770.3 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
PSME_00019595-RA No alias (at1g76310 : 144.0) core cell cycle genes; CYCLIN B2;4... 0.03 Orthogroups_2024-Update
Potri.002G119000 No alias CYCLIN D3;1 0.03 Orthogroups_2024-Update
Potri.006G088300 No alias CYCLIN D7;1 0.02 Orthogroups_2024-Update
Potri.007G005700 No alias CYCLIN D1;1 0.02 Orthogroups_2024-Update
Seita.3G370300.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Seita.4G104200.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.001G349600.2 No alias regulatory protein *(CYCD) of cell cycle 0.04 Orthogroups_2024-Update
Sobic.002G190700.2 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Sobic.005G231400.2 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006671 Cyclin_N 24 147
IPR004367 Cyclin_C-dom 151 248
No external refs found!