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  5. evm.model.contig_444.1

evm.model.contig_444.1


Description : (at5g02320 : 125.0) Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).; myb domain protein 3r-5 (MYB3R-5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 3r-3 (TAIR:AT3G09370.1). & (p20026|myb1_horvu : 119.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (reliability: 250.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_444.1
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
At1g16490 No alias Transcription factor MYB58... 0.03 Orthogroups_2024-Update
At4g12350 No alias Myb domain protein 42 [Source:UniProtKB/TrEMBL;Acc:Q9SPG1] 0.02 Orthogroups_2024-Update
Bradi1g64140 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi4g04050 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Bradi5g21970 No alias myb domain protein 50 0.02 Orthogroups_2024-Update
Brara.B03816.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.E03155.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.G00519.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G160838 No alias myb domain protein 4 0.01 Orthogroups_2024-Update
GRMZM2G161512 No alias myb domain protein 65 0.02 Orthogroups_2024-Update
Glyma.03G221700 No alias myb domain protein 2 0.02 Orthogroups_2024-Update
Glyma.05G040700 No alias myb domain protein 86 0.01 Orthogroups_2024-Update
Glyma.07G126900 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Glyma.13G066600 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G141900 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.02 Orthogroups_2024-Update
Glyma.20G082300 No alias myb domain protein 79 0.02 Orthogroups_2024-Update
LOC_Os02g40530 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os03g38210 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os09g36730 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os12g33070 No alias myb-like DNA-binding domain containing protein,... 0.01 Orthogroups_2024-Update
LOC_Os12g37690 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
MA_10048467g0010 No alias (at5g35550 : 171.0) TT2 encodes a R2R3 MYB domain... 0.01 Orthogroups_2024-Update
MA_8626g0010 No alias (at1g22640 : 166.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00021697-RA No alias (at5g15310 : 302.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00042627-RA No alias (at3g61250 : 265.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
Potri.006G066400 No alias myb domain protein 82 0.01 Orthogroups_2024-Update
Potri.008G081600 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Potri.010G064000 No alias myb domain protein 79 0.02 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.02 Orthogroups_2024-Update
Seita.4G115200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G183100.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.02 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g031840 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!