evm.model.contig_4461.11


Description : (at5g61770 : 211.0) PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description)


Gene families : OG_42_0005553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005553_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4461.11
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62800 No alias PETER PAN-like protein 0.03 Orthogroups_2024-Update
Brara.F02052.1 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.02 Orthogroups_2024-Update
Mp6g06030.1 No alias pre-60S ribosomal subunit assembly factor (SSF1) 0.04 Orthogroups_2024-Update
Seita.7G172300.1 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.02 Orthogroups_2024-Update
Seita.9G408900.1 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.02 Orthogroups_2024-Update
Sobic.001G376400.1 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.02 Orthogroups_2024-Update
evm.model.tig00020912.51 No alias (at5g61770 : 257.0) PETER PAN-like protein (PPAN);... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007109 Brix 39 288
No external refs found!