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  5. evm.model.contig_4467.1

evm.model.contig_4467.1


Description : (at3g13340 : 276.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G55680.1). & (reliability: 552.0) & (original description: no original description)


Gene families : OG_42_0000776 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4467.1
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
At1g36070 No alias At1g36070 [Source:UniProtKB/TrEMBL;Acc:Q0V7U5] 0.01 Orthogroups_2024-Update
Bradi3g56640 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Orthogroups_2024-Update
Brara.B01284.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.C03462.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.01 Orthogroups_2024-Update
Brara.E02782.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.01 Orthogroups_2024-Update
Glyma.17G003600 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Orthogroups_2024-Update
Potri.002G233700 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G147400 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Orthogroups_2024-Update
Pp1s32_210V6 No alias wd-40 repeat family protein 0.02 Orthogroups_2024-Update
Sobic.002G381700.2 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.01 Orthogroups_2024-Update
Solyc04g072890 No alias Transducin/WD40 repeat protein (AHRD V3.3 *-* G8A379_MEDTR) 0.01 Orthogroups_2024-Update
Sopen09g036250 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update
Sopen12g033440 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update
evm.model.tig00000711.5 No alias (at1g78070 : 428.0) Transducin/WD40 repeat-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0031419 cobalamin binding IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 440 472
No external refs found!