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  5. evm.model.contig_4470.3

evm.model.contig_4470.3


Description : (at4g39220 : 132.0) Key player of retrieval of ER membrane proteins; ATRER1A; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: endoplasmatic reticulum retrieval protein 1B (TAIR:AT2G21600.1); Has 516 Blast hits to 513 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 150; Plants - 130; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)


Gene families : OG_42_0001247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4470.3
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
At2g18240 No alias Protein RER1D [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPV7] 0.01 Orthogroups_2024-Update
At2g23310 No alias Protein RER1C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWI7] 0.02 Orthogroups_2024-Update
At4g39220 No alias Protein RER1A [Source:UniProtKB/Swiss-Prot;Acc:O48670] 0.03 Orthogroups_2024-Update
Brara.G00200.1 No alias membrane protein cargo receptor *(RER1) 0.02 Orthogroups_2024-Update
PSME_00051978-RA No alias (at4g39220 : 243.0) Key player of retrieval of ER... 0.01 Orthogroups_2024-Update
Sopen04g032110 No alias Rer1 family 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
CC GO:0005892 acetylcholine-gated channel complex IEP Predicted GO
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Predicted GO
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0034311 diol metabolic process IEP Predicted GO
BP GO:0034312 diol biosynthetic process IEP Predicted GO
CC GO:0034702 ion channel complex IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
CC GO:0043235 receptor complex IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0098802 plasma membrane receptor complex IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004932 Rer1 101 270
No external refs found!