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  5. evm.model.contig_4487.9

evm.model.contig_4487.9


Description : (at5g20720 : 135.0) Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.; chaperonin 20 (CPN20); CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, conserved site (InterPro:IPR018369), Chaperonin 21, chloroplast (InterPro:IPR017416), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chaperonin 10 (TAIR:AT1G14980.1). & (q02073|ch10c_spiol : 117.0) 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) - Spinacia oleracea (Spinach) & (reliability: 270.0) & (original description: no original description)


Gene families : OG_42_0002026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002026_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4487.9
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g54060 No alias chaperonin, putative, expressed 0.01 Orthogroups_2024-Update
MA_10430161g0010 No alias (at5g20720 : 311.0) Encodes a chloroplast co-chaperonin... 0.01 Orthogroups_2024-Update
Pp1s553_2V6 No alias chloroplast chaperonin 21 0.03 Orthogroups_2024-Update
Sobic.010G073700.1 No alias Hsp60-co-chaperone *(Hsp20) & auxiliary co-chaperone... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 146 236
IPR020818 Chaperonin_GroES 45 135
No external refs found!