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  5. evm.model.contig_4494.2

evm.model.contig_4494.2


Description : (p09044|g3pb_tobac : 462.0) Glyceraldehyde-3-phosphate dehydrogenase B, chloroplast precursor (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit B) (Fragment) - Nicotiana tabacum (Common tobacco) & (at1g42970 : 454.0) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.; glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828), Protein of unknown function CP12 (InterPro:IPR003823); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24904 Blast hits to 24897 proteins in 6198 species: Archae - 41; Bacteria - 10859; Metazoa - 2228; Fungi - 2814; Plants - 3753; Viruses - 0; Other Eukaryotes - 5209 (source: NCBI BLink). & (reliability: 908.0) & (original description: no original description)


Gene families : OG_42_0001623 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4494.2
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
270825 No alias glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.02 Orthogroups_2024-Update
A4A49_64290 No alias glyceraldehyde-3-phosphate dehydrogenase b, chloroplastic 0.02 Orthogroups_2024-Update
At1g42970 No alias Glyceraldehyde-3-phosphate dehydrogenase GAPB,... 0.02 Orthogroups_2024-Update
Brara.H00539.1 No alias glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) &... 0.01 Orthogroups_2024-Update
Brara.K00208.1 No alias glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) &... 0.03 Orthogroups_2024-Update
Cre01.g010900 No alias glyceraldehyde-3-phosphate dehydrogenase B subunit 0.04 Orthogroups_2024-Update
GRMZM5G845611 No alias glyceraldehyde-3-phosphate dehydrogenase B subunit 0.01 Orthogroups_2024-Update
Glyma.04G015900 No alias glyceraldehyde-3-phosphate dehydrogenase B subunit 0.03 Orthogroups_2024-Update
Glyma.06G015900 No alias glyceraldehyde-3-phosphate dehydrogenase B subunit 0.05 Orthogroups_2024-Update
Glyma.16G044900 No alias glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.04 Orthogroups_2024-Update
Glyma.19G106800 No alias glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G004830.6 No alias glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) &... 0.03 Orthogroups_2024-Update
HORVU4Hr1G082700.4 No alias glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) &... 0.03 Orthogroups_2024-Update
Kfl00100_0310 kfl00100_0310_v1.1 (p19866|g3pa_spiol : 531.0) Glyceraldehyde-3-phosphate... 0.04 Orthogroups_2024-Update
Kfl00141_0280 kfl00141_0280_v1.1 (p12859|g3pb_pea : 535.0) Glyceraldehyde-3-phosphate... 0.02 Orthogroups_2024-Update
MA_63231g0010 No alias (p19866|g3pa_spiol : 566.0) Glyceraldehyde-3-phosphate... 0.04 Orthogroups_2024-Update
MA_69727g0010 No alias (p12859|g3pb_pea : 619.0) Glyceraldehyde-3-phosphate... 0.05 Orthogroups_2024-Update
Mp2g19370.1 No alias glyceraldehyde 3-phosphate dehydrogenase 0.03 Orthogroups_2024-Update
Mp7g06610.1 No alias glyceraldehyde 3-phosphate dehydrogenase 0.01 Orthogroups_2024-Update
PSME_00032055-RA No alias (p19866|g3pa_spiol : 603.0) Glyceraldehyde-3-phosphate... 0.02 Orthogroups_2024-Update
Potri.014G140500 No alias glyceraldehyde 3-phosphate dehydrogenase A subunit 0.02 Orthogroups_2024-Update
Seita.7G123400.1 No alias glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) &... 0.03 Orthogroups_2024-Update
Seita.9G554700.1 No alias glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) &... 0.02 Orthogroups_2024-Update
Sobic.006G105900.1 No alias glyceraldehyde 3-phosphate dehydrogenase *(GAPDH) &... 0.03 Orthogroups_2024-Update
Solyc04g009030 No alias Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc04g082630 No alias Glyceraldehyde-3-phosphate dehydrogenase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g004990 No alias Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 0.03 Orthogroups_2024-Update
Sopen04g004210 No alias Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 0.03 Orthogroups_2024-Update
Sopen04g036260 No alias Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 0.03 Orthogroups_2024-Update
Sopen12g031540 No alias Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 0.03 Orthogroups_2024-Update
evm.model.tig00000157.36 No alias (p09043|g3pa_tobac : 459.0) Glyceraldehyde-3-phosphate... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR020828 GlycerAld_3-P_DH_NAD(P)-bd 61 163
IPR020829 GlycerAld_3-P_DH_cat 219 375
No external refs found!