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  5. evm.model.contig_489.5

evm.model.contig_489.5


Description : (at1g02080 : 340.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (reliability: 680.0) & (original description: no original description)


Gene families : OG_42_0002100 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_489.5
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
440060 No alias transcription regulators 0.01 Orthogroups_2024-Update
Bradi3g33190 No alias transcription regulators 0.01 Orthogroups_2024-Update
MA_42843g0010 No alias (at1g02080 : 1165.0) transcription regulators; FUNCTIONS... 0.02 Orthogroups_2024-Update
Pp1s41_25V6 No alias T7I23.15; transcriptional regulator-related [Arabidopsis... 0.02 Orthogroups_2024-Update
Sobic.001G299700.1 No alias scaffold component *(NOT1) of mRNA deadenylation CCR4-NOT complex 0.02 Orthogroups_2024-Update
evm.model.tig00000767.19 No alias (at1g02080 : 377.0) transcription regulators; FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR032193 CNOT1_TTP_bind 796 951
IPR032194 CNOT1_HEAT 553 671
IPR024557 CCR4-Not_Not1su_DUF3819 1527 1662
IPR032191 CNOT1_CAF1_bind 1044 1266
IPR007196 CCR4-Not_Not1_C 2249 2608
No external refs found!