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  5. Solyc01g008620

Solyc01g008620


Description : Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC)


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g008620
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_01055 No alias glucan endo-1,3-beta-glucosidase, acidic isoform gi9 0.05 Orthogroups_2024-Update
A4A49_02618 No alias glucan endo-1,3-beta-glucosidase 0.03 Orthogroups_2024-Update
A4A49_07438 No alias putative glucan endo-1,3-beta-glucosidase gvi 0.03 Orthogroups_2024-Update
At3g57240 No alias Probable glucan endo-1,3-beta-glucosidase BG3... 0.03 Orthogroups_2024-Update
At5g20340 No alias Probable glucan endo-1,3-beta-glucosidase BG5... 0.03 Orthogroups_2024-Update
Bradi2g27140 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g43056 No alias beta-1,3-glucanase 1 0.04 Orthogroups_2024-Update
Bradi2g60490 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
Brara.A01922.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Brara.J01566.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Glyma.11G095100 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G142400 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G113200 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G134800 No alias beta-1,3-glucanase 1 0.02 Orthogroups_2024-Update
HORVU3Hr1G105560.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU3Hr1G105630.7 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
LOC_Os01g58730 No alias glycosyl hydrolases family 17, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g71820 No alias glycosyl hydrolases family 17, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g41610 No alias glycosyl hydrolases family 17, putative, expressed 0.04 Orthogroups_2024-Update
MA_10432716g0010 No alias (p49237|e13b_maize : 235.0) Glucan... 0.03 Orthogroups_2024-Update
Mp7g13180.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.01 Orthogroups_2024-Update
PSME_00017374-RA No alias (p49237|e13b_maize : 292.0) Glucan... 0.04 Orthogroups_2024-Update
PSME_00017375-RA No alias (p23546|e13e_tobac : 273.0) Glucan... 0.02 Orthogroups_2024-Update
Potri.002G089200 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G048100 No alias beta-1,3-glucanase 1 0.04 Orthogroups_2024-Update
Potri.016G057600 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Seita.3G315000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G422000.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sobic.008G146700.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc02g086700 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC) 0.04 Orthogroups_2024-Update
Solyc03g025650 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q8S2G6_ORYSJ) 0.03 Orthogroups_2024-Update
Solyc04g016470 No alias LEQA L.esculentum TomQ'a beta(1,3)glucanase 0.03 Orthogroups_2024-Update
Sopen01g026150 No alias Glycosyl hydrolases family 17 0.02 Orthogroups_2024-Update
Sopen01g026170 No alias Glycosyl hydrolases family 17 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 26 335
No external refs found!