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  5. evm.model.contig_499.5

evm.model.contig_499.5


Description : (original description: no original description)


Gene families : OG_42_0003486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_499.5
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_00506 No alias 50s ribosomal protein l10, chloroplastic 0.02 Orthogroups_2024-Update
Cre06.g272850 No alias Ribosomal protein L10 family protein 0.02 Orthogroups_2024-Update
evm.model.tig00020516.18 No alias (at5g13510 : 86.7) Ribosomal protein L10 family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0042254 ribosome biogenesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 40 125
No external refs found!