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- Porphyridium purpureum
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- evm.model.contig_505.7
evm.model.contig_505.7
Description : (at5g58270 : 455.0) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.; ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 233.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 910.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Porphyridium release: evm.model.contig_505.7 | |
| Cluster | HCCA clusters: Cluster_15 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| Cre17.g727650 | No alias | ABC transporter of the mitochondrion 3 | 0.02 | Orthogroups_2024-Update | |
| Pp1s249_41V6 | No alias | abc transporter family of the mitochondria family | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0000166 | nucleotide binding | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0005215 | transporter activity | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
| CC | GO:0005575 | cellular_component | None | Extended |
| BP | GO:0006810 | transport | None | Extended |
| MF | GO:0008144 | drug binding | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| MF | GO:0015399 | primary active transmembrane transporter activity | None | Extended |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | None | Extended |
| CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
| MF | GO:0016462 | pyrophosphatase activity | None | Extended |
| MF | GO:0016787 | hydrolase activity | None | Extended |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | None | Extended |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | None | Extended |
| MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
| MF | GO:0017076 | purine nucleotide binding | None | Extended |
| MF | GO:0017111 | nucleoside-triphosphatase activity | None | Extended |
| MF | GO:0022804 | active transmembrane transporter activity | None | Extended |
| MF | GO:0022857 | transmembrane transporter activity | None | Extended |
| MF | GO:0030554 | adenyl nucleotide binding | None | Extended |
| CC | GO:0031224 | intrinsic component of membrane | None | Extended |
| MF | GO:0032553 | ribonucleotide binding | None | Extended |
| MF | GO:0032555 | purine ribonucleotide binding | None | Extended |
| MF | GO:0032559 | adenyl ribonucleotide binding | None | Extended |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | None | Extended |
| MF | GO:0036094 | small molecule binding | None | Extended |
| MF | GO:0042623 | ATPase activity, coupled | None | Extended |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043168 | anion binding | None | Extended |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | None | Extended |
| CC | GO:0044425 | membrane part | None | Extended |
| BP | GO:0051179 | localization | None | Extended |
| BP | GO:0051234 | establishment of localization | None | Extended |
| BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:0097367 | carbohydrate derivative binding | None | Extended |
| MF | GO:1901265 | nucleoside phosphate binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004615 | phosphomannomutase activity | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | Predicted GO |
| BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | Predicted GO |
| BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0010038 | response to metal ion | IEP | Predicted GO |
| BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
| BP | GO:0019673 | GDP-mannose metabolic process | IEP | Predicted GO |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
| BP | GO:0042221 | response to chemical | IEP | Predicted GO |
| MF | GO:0070403 | NAD+ binding | IEP | Predicted GO |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Predicted GO |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR003439 | ABC_transporter-like | 411 | 559 |
| IPR011527 | ABC1_TM_dom | 74 | 347 |
