1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. evm.model.contig_508.6

evm.model.contig_508.6


Description : (at5g09230 : 171.0) Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).; sirtuin 2 (SRT2); FUNCTIONS IN: NAD binding, DNA binding, zinc ion binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; INVOLVED IN: chromatin silencing, defense response to bacterium, negative regulation of defense response, regulation of transcription, DNA-dependent; LOCATED IN: chromatin silencing complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent histone deacetylase, silent information regulator Sir2 (InterPro:IPR003000); BEST Arabidopsis thaliana protein match is: sirtuin 1 (TAIR:AT5G55760.1); Has 6471 Blast hits to 6454 proteins in 2013 species: Archae - 152; Bacteria - 3779; Metazoa - 822; Fungi - 681; Plants - 106; Viruses - 0; Other Eukaryotes - 931 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)


Gene families : OG_42_0007493 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007493_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_508.6
Cluster HCCA clusters: Cluster_78


Type GO Term Name Evidence Source
MF GO:0070403 NAD+ binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
InterPro domains Description Start Stop
IPR003000 Sirtuin 43 256
No external refs found!