Description : (at3g21280 : 304.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 7 (UBP7); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 6 (TAIR:AT1G51710.1); Has 4498 Blast hits to 4321 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 2376; Fungi - 767; Plants - 642; Viruses - 2; Other Eukaryotes - 711 (source: NCBI BLink). & (reliability: 608.0) & (original description: no original description)
Gene families : OG_42_0005272 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Porphyridium release: evm.model.contig_527.1 | |
Cluster | HCCA clusters: Cluster_42 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g40820 | No alias | ubiquitin-specific protease 6 | 0.03 | Orthogroups_2024-Update | |
Brara.F00233.1 | No alias | deubiquitinase *(UBP6-7) | 0.02 | Orthogroups_2024-Update | |
Cre17.g726050 | No alias | ubiquitin-specific protease 7 | 0.05 | Orthogroups_2024-Update | |
Glyma.08G195900 | No alias | ubiquitin-specific protease 6 | 0.02 | Orthogroups_2024-Update | |
Potri.001G197400 | No alias | ubiquitin-specific protease 7 | 0.02 | Orthogroups_2024-Update | |
Sobic.003G186700.1 | No alias | deubiquitinase *(UBP6-7) | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00020554.157 | No alias | (at1g51710 : 330.0) Ubiquitin-specific protease 6... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016579 | protein deubiquitination | IEA | InterProScan predictions |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008452 | RNA ligase activity | IEP | Predicted GO |
MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
BP | GO:0009056 | catabolic process | IEP | Predicted GO |
BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predicted GO |
BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
MF | GO:0032977 | membrane insertase activity | IEP | Predicted GO |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0044248 | cellular catabolic process | IEP | Predicted GO |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001394 | Peptidase_C19_UCH | 121 | 497 |
No external refs found! |