Sopen01g012120


Description : gag-polypeptide of LTR copia-type


Gene families : OG_42_0002972 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002972_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g012120
Cluster HCCA clusters: Cluster_362


Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 1 63
IPR025724 GAG-pre-integrase_dom 544 613
IPR001584 Integrase_cat-core 630 742
No external refs found!