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  5. evm.model.contig_542.12

evm.model.contig_542.12


Description : (at5g39320 : 603.0) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13476 Blast hits to 13452 proteins in 2147 species: Archae - 313; Bacteria - 7039; Metazoa - 213; Fungi - 97; Plants - 213; Viruses - 14; Other Eukaryotes - 5587 (source: NCBI BLink). & (q96558|ugdh_soybn : 600.0) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (reliability: 1206.0) & (original description: no original description)


Gene families : OG_42_0001302 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_542.12
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
84327 No alias UDP-glucose 6-dehydrogenase family protein 0.02 Orthogroups_2024-Update
A4A49_17976 No alias udp-glucose 6-dehydrogenase 3 0.04 Orthogroups_2024-Update
At5g39320 No alias UDP-glucose 6-dehydrogenase 4... 0.02 Orthogroups_2024-Update
Brara.C00673.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.02 Orthogroups_2024-Update
Brara.J01951.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.02 Orthogroups_2024-Update
Cre06.g278185 No alias UDP-glucose dehydrogenase 1 0.01 Orthogroups_2024-Update
Glyma.01G057100 No alias UDP-glucose 6-dehydrogenase family protein 0.02 Orthogroups_2024-Update
Glyma.13G057700 No alias UDP-glucose 6-dehydrogenase family protein 0.01 Orthogroups_2024-Update
LOC_Os12g25690 No alias UDP-glucose 6-dehydrogenase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.017G092000 No alias UDP-glucose 6-dehydrogenase family protein 0.01 Orthogroups_2024-Update
Pp1s365_31V6 No alias udp-glucose dehydrogenase 0.01 Orthogroups_2024-Update
Seita.9G085800.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.01 Orthogroups_2024-Update
Sobic.001G084100.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.02 Orthogroups_2024-Update
Sobic.001G459800.1 No alias UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA InterProScan predictions
MF GO:0051287 NAD binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR014027 UDP-Glc/GDP-Man_DH_C 327 442
IPR014026 UDP-Glc/GDP-Man_DH_dimer 209 303
IPR001732 UDP-Glc/GDP-Man_DH_N 3 183
No external refs found!