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  5. evm.model.contig_545.15

evm.model.contig_545.15


Description : no hits & (original description: no original description)


Gene families : OG_42_0004219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_545.15
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G343917 No alias HAC13 protein (HAC13) 0.02 Orthogroups_2024-Update
HORVU7Hr1G115120.44 No alias component *(HAF/TAF1) of SAGA transcription co-activator... 0.02 Orthogroups_2024-Update
Seita.4G200100.1 No alias component *(HAF/TAF1) of TFIId basal transcription... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 1650 1705
IPR022591 TFIID_sub1_DUF3591 524 757
IPR022591 TFIID_sub1_DUF3591 847 1050
No external refs found!