Description : (at5g53350 : 303.0) CLP protease regulatory subunit CLPX mRNA, nuclear gene; CLP protease regulatory subunit X (CLPX); FUNCTIONS IN: unfolded protein binding, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein folding; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-2 (InterPro:IPR013093), Clp protease, ATP-binding subunit ClpX (InterPro:IPR004487); BEST Arabidopsis thaliana protein match is: ATP-dependent Clp protease (TAIR:AT1G33360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (gnl|cdd|68872 : 99.7) no description available & (reliability: 606.0) & (original description: no original description)
Gene families : OG_42_0001441 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001441_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Porphyridium release: evm.model.contig_562.2 | |
Cluster | HCCA clusters: Cluster_72 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc02g084120 | No alias | ATP-dependent Clp protease ATP-binding subunit ClpX... | 0.04 | Orthogroups_2024-Update | |
Solyc06g063410 | No alias | ATP-dependent clp protease ATP-binding subunit clpx,... | 0.03 | Orthogroups_2024-Update | |
Sopen02g028900 | No alias | AAA domain (Cdc48 subfamily) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
MF | GO:0045735 | nutrient reservoir activity | IEP | Predicted GO |
No external refs found! |