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  5. evm.model.contig_565.1

evm.model.contig_565.1


Description : (at5g07770 : 80.1) Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1). & (reliability: 160.2) & (original description: no original description)


Gene families : OG_42_0000436 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_565.1
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Bradi3g54030 No alias Actin-binding FH2 (Formin Homology) protein 0.02 Orthogroups_2024-Update
Bradi5g17100 No alias actin binding 0.02 Orthogroups_2024-Update
Kfl00111_0300 kfl00111_0300_v1.1 (at5g07740 : 363.0) actin binding; FUNCTIONS IN: actin... 0.02 Orthogroups_2024-Update
MA_4962g0010 No alias (at5g58160 : 520.0) actin binding; FUNCTIONS IN: actin... 0.02 Orthogroups_2024-Update
Seita.5G026200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.5G078800.1 No alias group-II formin actin filament elongation factor 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003911 DNA ligase (NAD+) activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 26 379
IPR015425 FH2_Formin 422 789
No external refs found!