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  5. evm.model.contig_570.4

evm.model.contig_570.4


Description : (at5g67270 : 105.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)


Gene families : OG_42_0001138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001138_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_570.4
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
57110 No alias end binding protein 1C 0.01 Orthogroups_2024-Update
66631 No alias end binding protein 1C 0.03 Orthogroups_2024-Update
Brara.I00858.1 No alias microtubule plus-end-tracking protein *(EB1) &... 0.06 Orthogroups_2024-Update
Glyma.11G052200 No alias end binding protein 1C 0.02 Orthogroups_2024-Update
Glyma.17G098700 No alias end binding protein 1B 0.02 Orthogroups_2024-Update
MA_10435567g0020 No alias (at5g67270 : 286.0) encodes a homolog of animal... 0.05 Orthogroups_2024-Update
Mp3g01400.1 No alias microtubule plus-end-tracking protein (EB1). MT... 0.02 Orthogroups_2024-Update
PSME_00019264-RA No alias (at5g67270 : 181.0) encodes a homolog of animal... 0.01 Orthogroups_2024-Update
Potri.005G142200 No alias end binding protein 1C 0.04 Orthogroups_2024-Update
Potri.007G048700 No alias end binding protein 1C 0.03 Orthogroups_2024-Update
Solyc02g092950 No alias RP/EB family microtubule-associated protein (AHRD V3.3... 0.08 Orthogroups_2024-Update
Sopen02g037510 No alias EB1-like C-terminal motif 0.04 Orthogroups_2024-Update
evm.model.tig00001206.14 No alias (at5g67270 : 151.0) encodes a homolog of animal... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001715 CH-domain 14 86
No external refs found!