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  5. evm.model.contig_579.4

evm.model.contig_579.4


Description : (at5g48810 : 84.7) Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.; cytochrome B5 isoform D (CB5-D); FUNCTIONS IN: heme binding; INVOLVED IN: defense response to bacterium; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform B (TAIR:AT2G32720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)


Gene families : OG_42_0000427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_579.4
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
A4A49_13336 No alias cytochrome b5 isoform e 0.02 Orthogroups_2024-Update
A4A49_30198 No alias cytochrome b5 0.05 Orthogroups_2024-Update
Bradi2g39310 No alias cytochrome B5 isoform B 0.04 Orthogroups_2024-Update
Brara.E01120.1 No alias cytochrome electron shuttle hemoprotein *(Cyt-b5) &... 0.02 Orthogroups_2024-Update
Cre16.g659350 No alias cytochrome B5 isoform D 0.03 Orthogroups_2024-Update
Glyma.18G154900 No alias cytochrome B5 isoform B 0.01 Orthogroups_2024-Update
Glyma.19G258500 No alias cytochrome B5 isoform E 0.04 Orthogroups_2024-Update
HORVU5Hr1G045040.1 No alias electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 Orthogroups_2024-Update
LOC_Os08g29669 No alias cytochrome b5-like Heme/Steroid binding domain... 0.02 Orthogroups_2024-Update
MA_137857g0010 No alias (p49098|cyb5_tobac : 214.0) Cytochrome b5 - Nicotiana... 0.02 Orthogroups_2024-Update
MA_20157g0010 No alias (p49100|cyb5_orysa : 120.0) Cytochrome b5 - Oryza sativa... 0.01 Orthogroups_2024-Update
PSME_00004175-RA No alias (p49100|cyb5_orysa : 117.0) Cytochrome b5 - Oryza sativa... 0.02 Orthogroups_2024-Update
PSME_00021528-RA No alias (at2g32720 : 216.0) member of Cytochromes b5; cytochrome... 0.02 Orthogroups_2024-Update
Pp1s120_113V6 No alias cytochrome b5 0.02 Orthogroups_2024-Update
Sobic.003G443300.1 No alias electron shuttle component *(Cyt-b5) of CER1-CER3... 0.01 Orthogroups_2024-Update
Sobic.009G008900.1 No alias electron shuttle component *(Cyt-b5) of CER1-CER3... 0.01 Orthogroups_2024-Update
Solyc03g082600 No alias Cytochrome b5 (AHRD V3.3 *** A0A0C5DKP2_CATRO) 0.02 Orthogroups_2024-Update
Solyc05g012080 No alias cytochrome b5 isoform B 0.01 Orthogroups_2024-Update
Solyc06g007930 No alias Cytochrome b5 (AHRD V3.3 *** CYB5_TOBAC) 0.02 Orthogroups_2024-Update
Solyc06g083440 No alias Cytochrome b5 (AHRD V3.3 *** CYB5_TOBAC) 0.01 Orthogroups_2024-Update
Sopen03g022360 No alias Cytochrome b5-like Heme/Steroid binding domain 0.02 Orthogroups_2024-Update
Sopen06g002780 No alias Cytochrome b5-like Heme/Steroid binding domain 0.02 Orthogroups_2024-Update
evm.model.tig00000203.15 No alias (at5g53560 : 111.0) Encodes a cytochrome b5 isoform that... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001199 Cyt_B5-like_heme/steroid-bd 11 79
No external refs found!