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  5. Solyc01g105860

Solyc01g105860


Description : (R)-limonene synthase (AHRD V1 ***- B9T537_RICCO)%3B contains Interpro domain(s) IPR005630 Terpene synthase%2C metal-binding domain


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g105860
Cluster HCCA clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
407280 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
412139 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
Brara.F03314.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Glyma.13G321100 No alias terpene synthase 03 0.03 Orthogroups_2024-Update
MA_10435706g0010 No alias (p93665|dcs1_goshi : 286.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
MA_10436878g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_8002141g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_9461183g0010 No alias (at4g16740 : 171.0) Encodes an (E,E)-alpha-farnesene... 0.03 Orthogroups_2024-Update
PSME_00003263-RA No alias (at4g02780 : 383.0) Catalyzes the conversion of... 0.02 Orthogroups_2024-Update
PSME_00003265-RA No alias (at4g02780 : 372.0) Catalyzes the conversion of... 0.02 Orthogroups_2024-Update
PSME_00004472-RA No alias (at3g25810 : 152.0) Terpenoid cyclases/Protein... 0.03 Orthogroups_2024-Update
PSME_00007190-RA No alias (at3g25810 : 158.0) Terpenoid cyclases/Protein... 0.03 Orthogroups_2024-Update
PSME_00007330-RA No alias (at4g16740 : 150.0) Encodes an (E,E)-alpha-farnesene... 0.04 Orthogroups_2024-Update
PSME_00007443-RA No alias (p93665|dcs1_goshi : 257.0) (+)-delta-cadinene synthase... 0.02 Orthogroups_2024-Update
PSME_00010279-RA No alias (at4g02780 : 364.0) Catalyzes the conversion of... 0.03 Orthogroups_2024-Update
PSME_00010326-RA No alias (p59287|cass_ricco : 263.0) Casbene synthase,... 0.04 Orthogroups_2024-Update
PSME_00011600-RA No alias (p59287|cass_ricco : 229.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00012291-RA No alias (p93665|dcs1_goshi : 240.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
PSME_00012312-RA No alias (p93665|dcs1_goshi : 216.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
PSME_00012615-RA No alias (p93665|dcs1_goshi : 220.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
PSME_00013124-RA No alias (p93665|dcs1_goshi : 234.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
PSME_00018711-RA No alias (p93665|dcs1_goshi : 196.0) (+)-delta-cadinene synthase... 0.03 Orthogroups_2024-Update
PSME_00024100-RA No alias (at4g16740 : 219.0) Encodes an (E,E)-alpha-farnesene... 0.02 Orthogroups_2024-Update
PSME_00025006-RA No alias (at4g16730 : 150.0) In the Col ecotype, no functional... 0.02 Orthogroups_2024-Update
PSME_00027421-RA No alias (o04408|ksa_pea : 118.0) Ent-kaurene synthase A,... 0.04 Orthogroups_2024-Update
PSME_00029104-RA No alias (p59287|cass_ricco : 216.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00030854-RA No alias (p59287|cass_ricco : 223.0) Casbene synthase,... 0.02 Orthogroups_2024-Update
PSME_00032144-RA No alias (at4g16740 : 225.0) Encodes an (E,E)-alpha-farnesene... 0.02 Orthogroups_2024-Update
PSME_00032510-RA No alias (at4g16730 : 184.0) In the Col ecotype, no functional... 0.03 Orthogroups_2024-Update
PSME_00033445-RA No alias (p93665|dcs1_goshi : 196.0) (+)-delta-cadinene synthase... 0.02 Orthogroups_2024-Update
PSME_00034521-RA No alias (p93665|dcs1_goshi : 185.0) (+)-delta-cadinene synthase... 0.02 Orthogroups_2024-Update
PSME_00041351-RA No alias (at1g70080 : 113.0) Terpenoid cyclases/Protein... 0.02 Orthogroups_2024-Update
PSME_00047233-RA No alias (o04408|ksa_pea : 138.0) Ent-kaurene synthase A,... 0.03 Orthogroups_2024-Update
Potri.011G031800 No alias terpene synthase-like sequence-1,8-cineole 0.04 Orthogroups_2024-Update
Potri.T001000 No alias terpene synthase-like sequence-1,8-cineole 0.03 Orthogroups_2024-Update
Sobic.006G027500.2 No alias EC_4.2 carbon-oxygen lyase &... 0.06 Orthogroups_2024-Update
Solyc01g105890 No alias Monoterpene synthase 1 0.03 Orthogroups_2024-Update
Sopen01g048320 No alias Terpene synthase, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 1 164
No external refs found!