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  5. Solyc01g105870

Solyc01g105870


Description : (E)-beta-ocimene synthase (AHRD V1 **** Q5CD81_CITUN)%3B contains Interpro domain(s) IPR005630 Terpene synthase%2C metal-binding domain


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g105870
Cluster HCCA clusters: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
MA_10426551g0010 No alias (p59287|cass_ricco : 248.0) Casbene synthase,... 0.04 Orthogroups_2024-Update
MA_10436878g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_86213g0010 No alias (at4g02780 : 365.0) Catalyzes the conversion of... 0.04 Orthogroups_2024-Update
MA_9401581g0010 No alias (o04408|ksa_pea : 146.0) Ent-kaurene synthase A,... 0.03 Orthogroups_2024-Update
PSME_00003113-RA No alias (at3g25810 : 250.0) Terpenoid cyclases/Protein... 0.04 Orthogroups_2024-Update
PSME_00003263-RA No alias (at4g02780 : 383.0) Catalyzes the conversion of... 0.02 Orthogroups_2024-Update
PSME_00007191-RA No alias (at4g16740 : 258.0) Encodes an (E,E)-alpha-farnesene... 0.03 Orthogroups_2024-Update
PSME_00012456-RA No alias (at4g16730 : 244.0) In the Col ecotype, no functional... 0.05 Orthogroups_2024-Update
PSME_00024100-RA No alias (at4g16740 : 219.0) Encodes an (E,E)-alpha-farnesene... 0.02 Orthogroups_2024-Update
PSME_00027421-RA No alias (o04408|ksa_pea : 118.0) Ent-kaurene synthase A,... 0.03 Orthogroups_2024-Update
PSME_00035829-RA No alias (q40577|5eas_tobac : 197.0) Aristolochene synthase (EC... 0.02 Orthogroups_2024-Update
PSME_00037858-RA No alias (at4g16740 : 161.0) Encodes an (E,E)-alpha-farnesene... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 67 248
IPR005630 Terpene_synthase_metal-bd 280 546
No external refs found!