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  5. evm.model.contig_836.3

evm.model.contig_836.3


Description : no hits & (original description: no original description)


Gene families : OG_42_0001006 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_836.3
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi1g08301 No alias Mitochondrial substrate carrier family protein 0.01 Orthogroups_2024-Update
Pp1s43_27V6 No alias mitochondrial carrier protein 0.01 Orthogroups_2024-Update
Seita.5G156700.1 No alias solute transporter *(MTCC) 0.02 Orthogroups_2024-Update
Sopen02g033900 No alias Mitochondrial carrier protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!