Description : (at3g63510 : 183.0) FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins in 2553 species: Archae - 58; Bacteria - 8007; Metazoa - 234; Fungi - 152; Plants - 146; Viruses - 0; Other Eukaryotes - 3067 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)
Gene families : OG_42_0005538 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005538_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Porphyridium release: evm.model.contig_903.1 | |
Cluster | HCCA clusters: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.08G090300 | No alias | FMN-linked oxidoreductases superfamily protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008033 | tRNA processing | IEA | InterProScan predictions |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEA | InterProScan predictions |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006812 | cation transport | IEP | Predicted GO |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Predicted GO |
CC | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | IEP | Predicted GO |
MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predicted GO |
BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044437 | vacuolar part | IEP | Predicted GO |
CC | GO:0071821 | FANCM-MHF complex | IEP | Predicted GO |
BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
BP | GO:1902600 | proton transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001269 | tRNA_hU_synthase | 1 | 196 |
No external refs found! |