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  4. Sequence
  5. 100308

100308


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0159330 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 100308
Cluster HCCA clusters: Cluster_7


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 321 345
IPR002885 Pentatricopeptide_repeat 98 121
IPR002885 Pentatricopeptide_repeat 222 249
IPR002885 Pentatricopeptide_repeat 252 266
IPR002885 Pentatricopeptide_repeat 190 219
IPR002885 Pentatricopeptide_repeat 159 187
IPR002885 Pentatricopeptide_repeat 128 156
No external refs found!