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  4. Sequence
  5. 10032

10032


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0001641 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 10032
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
At1g15290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi5g23890 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G028800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os04g55230 No alias tetratricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os07g23990 No alias tetratricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update
Seita.1G348600.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0042162 telomeric DNA binding IEP Predicted GO
MF GO:0043047 single-stranded telomeric DNA binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR028275 CLU_N 48 118
IPR033646 CLU-central 698 841
No external refs found!