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  4. Sequence
  5. 100350

100350


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0159332 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 100350
Cluster HCCA clusters: Cluster_7


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 320 348
IPR002885 Pentatricopeptide_repeat 423 446
IPR002885 Pentatricopeptide_repeat 129 158
IPR002885 Pentatricopeptide_repeat 351 380
IPR002885 Pentatricopeptide_repeat 195 224
IPR002885 Pentatricopeptide_repeat 36 63
IPR002885 Pentatricopeptide_repeat 68 97
IPR002885 Pentatricopeptide_repeat 227 254
IPR002885 Pentatricopeptide_repeat 99 127
IPR002885 Pentatricopeptide_repeat 164 194
No external refs found!