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  4. Sequence
  5. 101338

101338


Description : pleiotropic drug resistance 11


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 101338
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
235359 No alias pleiotropic drug resistance 6 0.05 Orthogroups_2024-Update
412710 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
417266 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
426328 No alias pleiotropic drug resistance 6 0.04 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
96758 No alias pleiotropic drug resistance 12 0.06 Orthogroups_2024-Update
99541 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_20840 No alias abc transporter g family member 36 0.02 Orthogroups_2024-Update
Brara.G02000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Glyma.03G168101 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
Glyma.07G015800 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G037750.28 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Kfl00018_0500 kfl00018_0500_v1.1 (q8gu90|pdr3_orysa : 1455.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
Kfl00616_0050 kfl00616_0050_v1.1 (at1g59870 : 1348.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00000867-RA No alias (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00007342-RA No alias (q5z9s8|pdr12_orysa : 477.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00010410-RA No alias (q8gu88|pdr7_orysa : 1693.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
Potri.018G032900 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Pp1s15_137V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s59_42V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Pp1s72_306V6 No alias atp-binding cassette 0.03 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.05 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.002G203800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215300.2 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G215600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g100180 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
evm.model.tig00020902.2 No alias (at3g16340 : 221.0) pleiotropic drug resistance 1... 0.01 Orthogroups_2024-Update
evm.model.tig00020902.3 No alias (at3g55110 : 182.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
CC GO:0070531 BRCA1-A complex IEP Predicted GO
CC GO:0070552 BRISC complex IEP Predicted GO
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 92 143
IPR003439 ABC_transporter-like 853 1005
IPR003439 ABC_transporter-like 169 351
IPR013525 ABC_2_trans 1151 1363
IPR013525 ABC_2_trans 506 715
IPR013581 PDR_assoc 725 781
No external refs found!