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  5. 101375

101375


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 101375
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Brara.I01670.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G306700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Kfl00222_0020 kfl00222_0020_v1.1 (at1g17640 : 196.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
LOC_Os01g56120 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00002450-RA No alias (at3g13224 : 266.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
Seita.9G075200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
CC GO:0019008 molybdopterin synthase complex IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 72
IPR000504 RRM_dom 111 167
No external refs found!