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  4. Sequence
  5. 102790

102790


Description : CONSTANS-like 4


Gene families : OG_42_0000725 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 102790
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
A4A49_15211 No alias zinc finger protein constans-like 4 0.03 Orthogroups_2024-Update
A4A49_38205 No alias zinc finger protein constans-like 5 0.04 Orthogroups_2024-Update
At2g24790 No alias Zinc finger protein CONSTANS-LIKE 3... 0.02 Orthogroups_2024-Update
At5g57660 No alias Zinc finger protein CONSTANS-LIKE 5... 0.03 Orthogroups_2024-Update
Bradi3g48447 No alias CONSTANS-like 3 0.02 Orthogroups_2024-Update
Brara.B01196.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Brara.I00559.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Brara.J01926.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G148772 No alias CONSTANS-like 5 0.02 Orthogroups_2024-Update
GRMZM2G405368 No alias CONSTANS-like 2 0.02 Orthogroups_2024-Update
Glyma.06G059600 No alias CONSTANS-like 4 0.02 Orthogroups_2024-Update
Glyma.13G093800 No alias CONSTANS-like 5 0.04 Orthogroups_2024-Update
Glyma.17G066600 No alias CONSTANS-like 5 0.04 Orthogroups_2024-Update
LOC_Os04g42020 No alias CCT/B-box zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g44450 No alias CCT/B-box zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s364_5V6 No alias col3 gene for putative COSTANS-like 3 protein COL3 0.02 Orthogroups_2024-Update
Pp1s371_27V6 No alias col1 gene for putative CONSTANS-like 1 protein COL1 0.02 Orthogroups_2024-Update
Pp1s97_109V6 No alias col2 gene for putative CONSTANS-like 2 protein COL2 0.03 Orthogroups_2024-Update
Seita.1G228800.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G211200.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G252300.1 No alias floral promoter *(CONSTANS) 0.02 Orthogroups_2024-Update
Sobic.006G135100.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G214000.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Solyc02g089540 No alias CONSTANS 1 0.03 Orthogroups_2024-Update
Solyc07g006630 No alias CONSTANS-like protein (AHRD V3.3 *** B2MW87_SOLLC) 0.03 Orthogroups_2024-Update
Solyc12g096500 No alias CONSTANS-like protein (AHRD V3.3 *** Q0MQL9_SOLTU) 0.03 Orthogroups_2024-Update
Sopen02g034260 No alias CCT motif 0.03 Orthogroups_2024-Update
Sopen07g002740 No alias CCT motif 0.02 Orthogroups_2024-Update
Sopen08g002490 No alias CCT motif 0.03 Orthogroups_2024-Update
Sopen12g032330 No alias CCT motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 45 90
No external refs found!