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  5. 105818

105818


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0012143 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 105818
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
130540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
134538 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
97139 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
MA_958908g0010 No alias (at2g22070 : 545.0) pentatricopeptide (PPR)... 0.04 Orthogroups_2024-Update
PSME_00013891-RA No alias (at5g16860 : 595.0) Tetratricopeptide repeat (TPR)-like... 0.05 Orthogroups_2024-Update
Sopen00g007410 No alias PPR repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 151 166
IPR002885 Pentatricopeptide_repeat 121 150
IPR002885 Pentatricopeptide_repeat 19 45
IPR002885 Pentatricopeptide_repeat 46 92
No external refs found!