1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. 106096

106096


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 106096
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
116842 No alias mitochondrial editing factor 22 0.03 Orthogroups_2024-Update
MA_99849g0010 No alias (at4g02750 : 581.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Seita.1G076000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G361000.1 No alias RNA editing factor *(MEF10) 0.03 Orthogroups_2024-Update
Seita.9G355700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G275900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g024500 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 977 1097
IPR002885 Pentatricopeptide_repeat 296 343
IPR002885 Pentatricopeptide_repeat 703 747
IPR002885 Pentatricopeptide_repeat 805 850
IPR002885 Pentatricopeptide_repeat 89 139
IPR002885 Pentatricopeptide_repeat 505 551
IPR002885 Pentatricopeptide_repeat 374 397
IPR002885 Pentatricopeptide_repeat 477 499
IPR002885 Pentatricopeptide_repeat 779 798
IPR002885 Pentatricopeptide_repeat 576 598
IPR002885 Pentatricopeptide_repeat 604 634
IPR002885 Pentatricopeptide_repeat 170 195
IPR002885 Pentatricopeptide_repeat 269 293
No external refs found!