Description : mitochondrial editing factor 22
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 107304 | |
Cluster | HCCA clusters: Cluster_216 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
16621 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
MA_10277392g0010 | No alias | (at4g18750 : 498.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00005130-RA | No alias | (at4g33990 : 552.0) embryo defective 2758 (EMB2758);... | 0.02 | Orthogroups_2024-Update | |
PSME_00010400-RA | No alias | (at4g02750 : 490.0) Tetratricopeptide repeat (TPR)-like... | 0.01 | Orthogroups_2024-Update | |
PSME_00015835-RA | No alias | (at4g01030 : 610.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00032004-RA | No alias | (at1g19720 : 530.0) Pentatricopeptide repeat (PPR-like)... | 0.02 | Orthogroups_2024-Update | |
PSME_00036890-RA | No alias | (at1g11290 : 679.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
PSME_00038093-RA | No alias | (at2g27610 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00039409-RA | No alias | (at4g18750 : 537.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00056966-RA | No alias | (at4g13650 : 674.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
Pp1s169_110V6 | No alias | T12J13.14; pentatricopeptide (PPR) repeat-containing... | 0.01 | Orthogroups_2024-Update | |
Sobic.003G433600.1 | No alias | RNA editing factor *(OTP72) | 0.02 | Orthogroups_2024-Update | |
Solyc01g006920 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc01g100800 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
Solyc02g079260 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc04g051480 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc07g055310 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc09g010070 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Sopen03g028590 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
BP | GO:0032465 | regulation of cytokinesis | IEP | Predicted GO |
BP | GO:0032954 | regulation of cytokinetic process | IEP | Predicted GO |
BP | GO:0032955 | regulation of division septum assembly | IEP | Predicted GO |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Predicted GO |
BP | GO:0051301 | cell division | IEP | Predicted GO |
BP | GO:0051302 | regulation of cell division | IEP | Predicted GO |
BP | GO:1901891 | regulation of cell septum assembly | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 181 | 208 |
IPR002885 | Pentatricopeptide_repeat | 153 | 179 |
IPR002885 | Pentatricopeptide_repeat | 456 | 480 |
IPR002885 | Pentatricopeptide_repeat | 281 | 328 |
IPR002885 | Pentatricopeptide_repeat | 381 | 425 |
IPR002885 | Pentatricopeptide_repeat | 77 | 117 |
IPR032867 | DYW_dom | 547 | 662 |
No external refs found! |