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  5. Solyc01g105960

Solyc01g105960


Description : (E)-beta-ocimene synthase


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g105960
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G122500 No alias terpene synthase 03 0.03 Orthogroups_2024-Update
Glyma.12G102000 No alias terpene synthase-like sequence-1,8-cineole 0.02 Orthogroups_2024-Update
Glyma.13G304700 No alias terpene synthase 02 0.02 Orthogroups_2024-Update
MA_10426551g0010 No alias (p59287|cass_ricco : 248.0) Casbene synthase,... 0.06 Orthogroups_2024-Update
MA_10435955g0010 No alias (o04408|ksa_pea : 162.0) Ent-kaurene synthase A,... 0.03 Orthogroups_2024-Update
MA_10436878g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_111325g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_1830g0010 No alias (p59287|cass_ricco : 269.0) Casbene synthase,... 0.02 Orthogroups_2024-Update
MA_491032g0010 No alias (at4g02780 : 134.0) Catalyzes the conversion of... 0.02 Orthogroups_2024-Update
MA_70145g0010 No alias (at4g16740 : 253.0) Encodes an (E,E)-alpha-farnesene... 0.03 Orthogroups_2024-Update
MA_8002141g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_823966g0010 No alias (at2g24210 : 162.0) terpene synthase 10 (TPS10);... 0.02 Orthogroups_2024-Update
MA_9401581g0010 No alias (o04408|ksa_pea : 146.0) Ent-kaurene synthase A,... 0.03 Orthogroups_2024-Update
PSME_00003264-RA No alias (at4g02780 : 395.0) Catalyzes the conversion of... 0.03 Orthogroups_2024-Update
PSME_00003483-RA No alias (p93665|dcs1_goshi : 253.0) (+)-delta-cadinene synthase... 0.04 Orthogroups_2024-Update
PSME_00008408-RA No alias (at4g02780 : 401.0) Catalyzes the conversion of... 0.02 Orthogroups_2024-Update
PSME_00010279-RA No alias (at4g02780 : 364.0) Catalyzes the conversion of... 0.03 Orthogroups_2024-Update
PSME_00013986-RA No alias (at4g16730 : 247.0) In the Col ecotype, no functional... 0.02 Orthogroups_2024-Update
PSME_00044370-RA No alias (at4g16730 : 128.0) In the Col ecotype, no functional... 0.04 Orthogroups_2024-Update
Potri.001G308300 No alias terpene synthase-like sequence-1,8-cineole 0.05 Orthogroups_2024-Update
Potri.011G031800 No alias terpene synthase-like sequence-1,8-cineole 0.03 Orthogroups_2024-Update
Solyc01g105920 No alias (E)-beta-ocimene synthase 0.02 Orthogroups_2024-Update
Solyc02g079840 No alias terpene synthase 0.04 Orthogroups_2024-Update
Sopen01g048290 No alias Terpene synthase family, metal binding domain 0.04 Orthogroups_2024-Update
Sopen01g048300 No alias Terpene synthase family, metal binding domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 41 218
IPR005630 Terpene_synthase_metal-bd 250 347
No external refs found!