1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. 109195

109195


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0011490 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011490_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 109195
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
MA_111990g0010 No alias (at2g13600 : 466.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_113119g0010 No alias (at3g02330 : 342.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_4511g0010 No alias (at3g02330 : 493.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_68718g0020 No alias (at4g02750 : 556.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00024922-RA No alias (at4g13650 : 482.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00028093-RA No alias (at4g02750 : 549.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 94 141
IPR002885 Pentatricopeptide_repeat 1 26
IPR002885 Pentatricopeptide_repeat 198 227
IPR002885 Pentatricopeptide_repeat 170 196
IPR002885 Pentatricopeptide_repeat 69 89
IPR002885 Pentatricopeptide_repeat 233 260
IPR002885 Pentatricopeptide_repeat 271 294
No external refs found!