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  5. 109226

109226


Description : lipoxygenase 1


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 109226
Cluster HCCA clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G109056 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
LOC_Os06g04420 No alias lipoxygenase 4, putative 0.02 Orthogroups_2024-Update
LOC_Os08g39840 No alias lipoxygenase, chloroplast precursor, putative, expressed 0.01 Orthogroups_2024-Update
PSME_00003701-RA No alias (at1g55020 : 1024.0) lipoxygenase, a defense gene... 0.05 Orthogroups_2024-Update
PSME_00018807-RA No alias (at1g55020 : 1015.0) lipoxygenase, a defense gene... 0.02 Orthogroups_2024-Update
Potri.005G032600 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
Seita.7G113700.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.02 Orthogroups_2024-Update
Solyc01g009680 No alias Lipoxygenase (AHRD V3.3 *** K4ATG3_SOLLC) 0.02 Orthogroups_2024-Update
Sopen03g041110 No alias Lipoxygenase 0.01 Orthogroups_2024-Update
Sopen05g009950 No alias Lipoxygenase 0.01 Orthogroups_2024-Update
Sopen09g030670 No alias Lipoxygenase 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 70 162
IPR013819 LipOase_C 176 835
No external refs found!