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  5. 110655

110655


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0008933 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 110655
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
At5g27270 No alias Pentatricopeptide repeat-containing protein At5g27270... 0.03 Orthogroups_2024-Update
Mp1g22180.1 No alias Pentatricopeptide repeat-containing protein At5g27270... 0.03 Orthogroups_2024-Update
Pp1s98_10V6 No alias pentatricopeptide repeat-containing 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 965 1013
IPR002885 Pentatricopeptide_repeat 309 353
IPR002885 Pentatricopeptide_repeat 623 670
IPR002885 Pentatricopeptide_repeat 899 944
IPR033443 PPR_long 425 577
IPR002885 Pentatricopeptide_repeat 830 858
IPR002885 Pentatricopeptide_repeat 794 823
IPR002885 Pentatricopeptide_repeat 278 304
IPR002885 Pentatricopeptide_repeat 1039 1068
IPR002885 Pentatricopeptide_repeat 592 620
IPR002885 Pentatricopeptide_repeat 384 411
No external refs found!