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  5. 111998

111998


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 111998
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G117001 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
MA_177230g0010 No alias (at2g22070 : 585.0) pentatricopeptide (PPR)... 0.04 Orthogroups_2024-Update
MA_39595g0010 No alias (at1g08070 : 552.0) Encodes a chloroplast RNA editing... 0.04 Orthogroups_2024-Update
PSME_00008509-RA No alias (at1g11290 : 604.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
PSME_00056623-RA No alias (at2g03880 : 555.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
Sopen02g015160 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen03g024500 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen04g036510 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 366 385
IPR002885 Pentatricopeptide_repeat 2 22
IPR002885 Pentatricopeptide_repeat 24 47
IPR002885 Pentatricopeptide_repeat 123 147
IPR002885 Pentatricopeptide_repeat 286 329
IPR002885 Pentatricopeptide_repeat 183 229
No external refs found!