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  5. 112120

112120


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 112120
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
A4A49_35982 No alias ultraviolet-b receptor uvr8 0.03 Orthogroups_2024-Update
A4A49_39411 No alias ultraviolet-b receptor uvr8 0.02 Orthogroups_2024-Update
At3g47660 No alias Regulator of chromosome condensation (RCC1) family... 0.03 Orthogroups_2024-Update
Glyma.14G034200 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
Glyma.20G165400 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
HORVU2Hr1G124270.6 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G285000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g081250 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 433 481
IPR000408 Reg_chr_condens 547 596
IPR000408 Reg_chr_condens 495 544
IPR000408 Reg_chr_condens 326 374
IPR000408 Reg_chr_condens 601 648
IPR000408 Reg_chr_condens 377 428
IPR000306 Znf_FYVE 652 718
IPR001849 PH_domain 15 122
IPR013591 Brevis_radix_dom 1021 1076
IPR027988 BRX_N 907 936
No external refs found!