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  5. 115821

115821


Description : ABC-2 and Plant PDR ABC-type transporter family protein


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 115821
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
A4A49_00289 No alias abc transporter g family member 32 0.03 Orthogroups_2024-Update
A4A49_31699 No alias pleiotropic drug resistance protein 2 0.03 Orthogroups_2024-Update
At1g59870 No alias ABC transporter G family member 36... 0.02 Orthogroups_2024-Update
Cre04.g224400 No alias pleiotropic drug resistance 7 0.02 Orthogroups_2024-Update
Cre17.g728400 No alias pleiotropic drug resistance 3 0.01 Orthogroups_2024-Update
GRMZM2G118243 No alias pleiotropic drug resistance 4 0.03 Orthogroups_2024-Update
Glyma.03G168000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G192600 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.19G169200 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
LOC_Os07g33780 No alias pleiotropic drug resistance protein 5, putative, expressed 0.02 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Mp4g06670.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
PSME_00000867-RA No alias (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00006563-RA No alias (q5z9s8|pdr12_orysa : 1128.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.001G048700 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Seita.6G234600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.001G000400.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.002G174000.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc08g067620 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen05g032100 No alias ABC-2 type transporter 0.04 Orthogroups_2024-Update
Sopen09g034580 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update
Sopen11g003190 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 738 799
IPR003439 ABC_transporter-like 886 1038
IPR013525 ABC_2_trans 521 732
IPR013525 ABC_2_trans 1183 1396
IPR029481 ABC_trans_N 104 160
IPR003439 ABC_transporter-like 185 367
No external refs found!