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  4. Sequence
  5. 116842

116842


Description : mitochondrial editing factor 22


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 116842
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
106096 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G085150.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G040610.4 No alias Unknown function 0.02 Orthogroups_2024-Update
Pp1s48_253V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 317 345
IPR002885 Pentatricopeptide_repeat 118 145
IPR002885 Pentatricopeptide_repeat 291 312
IPR002885 Pentatricopeptide_repeat 387 412
IPR002885 Pentatricopeptide_repeat 220 266
No external refs found!