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  5. 121399

121399


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0022637 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 121399
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
PSME_00056971-RA No alias (at4g02750 : 387.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 265 313
IPR002885 Pentatricopeptide_repeat 506 553
IPR002885 Pentatricopeptide_repeat 125 174
IPR002885 Pentatricopeptide_repeat 335 384
IPR002885 Pentatricopeptide_repeat 405 454
IPR002885 Pentatricopeptide_repeat 195 243
IPR002885 Pentatricopeptide_repeat 22 71
IPR002885 Pentatricopeptide_repeat 574 622
IPR002885 Pentatricopeptide_repeat 466 498
IPR002885 Pentatricopeptide_repeat 88 118
No external refs found!