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  5. 122489

122489


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 122489
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Brara.B00112.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03962.1 No alias RNA editing factor *(OTP84) 0.02 Orthogroups_2024-Update
Sopen03g035770 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 228 275
IPR002885 Pentatricopeptide_repeat 430 477
IPR002885 Pentatricopeptide_repeat 326 374
IPR002885 Pentatricopeptide_repeat 201 224
IPR002885 Pentatricopeptide_repeat 99 124
IPR002885 Pentatricopeptide_repeat 24 53
IPR002885 Pentatricopeptide_repeat 127 157
No external refs found!