123490

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG_42_0001056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Selaginella: 123490

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g16520	No alias	U2 snRNP auxiliary factor small subunit, putative	0.02	Orthogroups_2024-Update
LOC_Os05g48960	No alias	splicing factor U2AF, putative, expressed	0.01	Orthogroups_2024-Update
Pp1s215_70V6	No alias	splicing factor u2af 38 kda subunit	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	84	140
IPR000571	Znf_CCCH	17	42

External Links

No external refs found!