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  5. 129201

129201


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 129201
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
A4A49_42233 No alias putative e3 ubiquitin-protein ligase rhc1a 0.02 Orthogroups_2024-Update
Bradi3g37800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G049346 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.02 Orthogroups_2024-Update
GRMZM2G473016 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Glyma.17G082500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os07g43740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.5G351000.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc08g067290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G20910.1) 0.03 Orthogroups_2024-Update
Sopen02g015860 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen03g029300 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045926 negative regulation of growth IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 215 257
No external refs found!