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  4. Sequence
  5. 131123

131123


Description : Function unknown


Gene families : OG_42_0004844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 131123
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G149120 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.001G306932 No alias Function unknown 0.02 Orthogroups_2024-Update
Seita.7G287600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen11g001480 No alias Alginate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR014895 Alginate_lyase_2 32 208
No external refs found!