1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. 131641

131641


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 131641
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
102435 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
27025 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g59070 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.I03962.1 No alias RNA editing factor *(OTP84) 0.03 Orthogroups_2024-Update
HORVU0Hr1G001760.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_519985g0010 No alias (at3g03580 : 679.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00031408-RA No alias (at4g30700 : 283.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00031504-RA No alias (at3g23330 : 207.0) Tetratricopeptide repeat (TPR)-like... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 191 221
IPR002885 Pentatricopeptide_repeat 65 92
IPR002885 Pentatricopeptide_repeat 163 182
IPR002885 Pentatricopeptide_repeat 93 116
IPR002885 Pentatricopeptide_repeat 263 286
IPR002885 Pentatricopeptide_repeat 226 256
No external refs found!