1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. 137981

137981


Description : Structural maintenance of chromosomes (SMC) family protein


Gene families : OG_42_0005833 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005833_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 137981
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At5g62410 No alias Structural maintenance of chromosomes protein 2-1... 0.04 Orthogroups_2024-Update
Brara.F02117.1 No alias component *(CAP-E2/SMC2) of condensin I/II complex 0.02 Orthogroups_2024-Update
Cre02.g086650 No alias structural maintenance of chromosomes 2 0.02 Orthogroups_2024-Update
Glyma.12G236600 No alias structural maintenance of chromosomes 2 0.05 Orthogroups_2024-Update
Glyma.13G202100 No alias structural maintenance of chromosomes 2 0.05 Orthogroups_2024-Update
Kfl00001_0690 kfl00001_0690_v1.1 (at5g62410 : 1028.0) SMC2-1 (SMC2); structural... 0.02 Orthogroups_2024-Update
Solyc03g093250 No alias Structural maintenance of chromosomes protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc03g093260 No alias Structural maintenance of chromosomes protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen03g024050 No alias RecF/RecN/SMC N terminal domain 0.03 Orthogroups_2024-Update
evm.model.contig_575.3 No alias (at3g47460 : 681.0) member of SMC subfamily; ATSMC2;... 0.04 Orthogroups_2024-Update
evm.model.tig00000615.55 No alias (at5g62410 : 590.0) SMC2-1 (SMC2); structural... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0005694 chromosome IEA InterProScan predictions
BP GO:0051276 chromosome organization IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009555 pollen development IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048229 gametophyte development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010935 SMC_hinge 519 638
IPR003395 RecF/RecN/SMC_N 2 1161
No external refs found!