Sopen01g016080

Description : Reverse transcriptase (RNA-dependent DNA polymerase)

Gene families : OG_42_0000478 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g016080
Cluster	HCCA clusters: Cluster_389

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi2g03108	No alias	Function unknown	0.02	Orthogroups_2024-Update
Bradi2g35460	No alias	XH/XS domain-containing protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016458	gene silencing	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	gene silencing by RNA	IEA	InterProScan predictions
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005380	XS_domain	157	193
IPR005379	Uncharacterised_XH	395	502
IPR013103	RVT_2	669	909
IPR013103	RVT_2	1297	1375
IPR005381	Znf-XS_domain	41	83

External Links

No external refs found!